Publications

Use the Medline links to read the abstracts of these papers and find links to related papers.

Protein folding and assembly.
Goldenberg, D. P. (2004) In Encyclopedia of Biological Chemistry (W. J. Lennarz and M. Lane, eds.), vol. 3, pp. 493-499. Academic Press/Elsevier Science, San Diego. pdf file

Alteration of the disulfide-coupled folding pathway of BPTI by circular permutation.
Bulaj, G., Koehn, R. E. and Goldenberg, D. P. (2004) Protein Sci. 13, 1182-1196. Medline

Identification of a residue critical for maintaining the functional conformation of BPTI.
Hanson, W. M., Beeser, S. A., Oas, T. G. and Goldenberg, D. P. (2003)J. Mol. Biol. pp. 425-441. Medline

Computational simulation of the statistical properties of unfolded proteins.
Goldenberg, D. P. (2003) J. Mol. Biol. 326, 1615-1633. Medline

The Cys-Xaa-His metal-binding motif. N versus S coordination and nickel-mediated formation of cysteinyl sulfinic acid.
van Horn, J. D., Bulaj, G., Goldenberg, D. P. and Burrows, C. J. (2003)J. Biol. Inorg. Chem. 8, 601-610. Medline

Initial disulfide formation steps in the folding of an w-conotoxin.
Price-Carter, M., Bulaj, G. and Goldenberg, D. P. (2002) Biochemistry 41, 3507-3519. Medline

Solution structure and backbone dynamics of an w-conotoxin precursor.
Goldenberg, D. P., Koehn, R. E., Gilbert, D. E. and Wagner, G. (2001) Protein Sci. 10, 538-550. Medline

f-Values for BPTI folding intermediates and implications for transition states.
Bulaj, G. and Goldenberg, D. P. (2001) Nature Struct. Biol. 8, 326-330. Medline

Mutational analysis of hydrogen bonding residues in the BPTI folding pathway.
Bulaj, G. and Goldenberg, D. P. (2001) J. Mol. Biol. 313, 639-656. Medline

Structure-Activity Relationships for the Interaction of Bovine Pancreatic Trypsin Inhibitor with an Intracellular Site on a Large Conductance Ca2+-Activated K+ Channel.
Favre, I., Moss, G. W. J., Goldenberg, D. P., Otlewski, E. and Moczydlowski, E. (2000) Biochemistry 39, 2001-2012. Medline

Tyrosine, phenylalanine and disulfide contributions to the circular dichroism of proteins: CD spectra of wild-type and mutant bovine pancreatic trypsin inhibitor.
Sreerama, N., Manning, M. C., Powers, M. E., Zhang, J.-X., Goldenberg, D. P. and Woody, R. W. (1999) Biochemistry 38, 10814 -10822. Medline

Finding the right fold. (Commentary)
Goldenberg, D. P. (1999) Nature Struct. Biol. 6, 987-990. Medline

Early events in the disulfide-coupled folding of BPTI.
Bulaj, G. and Goldenberg, D. P. (1999) Protein Sci. 8, 1825-1842. Medline

Roles of individual disulfide bonds in the stability and folding of an w-conotoxin.
Price-Carter, M., Hull, M. S. and Goldenberg, D. P. (1998) Biochemistry 37, 9851-9861. Medline

Ionization-reactivity relationships for cysteine thiols in polypeptides.
Bulaj, G., Kortemme, T. and Goldenberg, D. P. (1998) Biochemistry 37, 8965-8972. Medline

Determinants of backbone dynamics in native BPTI: Cooperative influence of the 14-38 disulfide and the Tyr 35 side chain.
Beeser, S. A., Oas, T. G. and Goldenberg, D. P. (1998) J. Mol. Biol. 284, 1581-1596. Medline

Mutational analysis of the BPTI folding pathway: I. Effects of aromatic -> Leu substitutions on the distribution of folding intermediates. Zhang, J.-X. and Goldenberg, D. P. (1997) Protein Sci. 6, 1549-1562. Medline

Mutational analysis of the BPTI folding pathway: II. Effects of aromatic -> Leu substitutions on folding kinetics and thermodynamics.
Zhang, J.-X. and Goldenberg, D. P. (1997) Protein Sci. 6, 1563-1576. Medline

Analysis of protein conformation by gel electrophoresis.
Goldenberg, D. P. (1997) In Protein Structure: A Practical Approach, 2nd ed(T. Creighton, ed.), pp. 187-218. IRL Press, Oxford.

Enhanced protein flexibility caused by a destabilizing amino acid replacement in BPTI.
Beeser, S. A., Goldenberg, D. P. and Oas, T. G. (1997) J. Mol. Biol. 269, 154-164. Medline

Folding of w-conotoxins. 1. Efficient disulfide-coupled folding of mature sequences in vitro.
Price-Carter, M., Gray, W. R. and Goldenberg, D. P. (1996) Biochemistry 35, 15537-15546. Medline

Folding of w-conotoxins. 2. Influence of precursor sequences and protein disulfide isomerase.
Price-Carter, M., Gray, W. R. and Goldenberg, D. P. (1996) Biochemistry 35, 15547-15557. Medline

Transverse urea-gradient gel electrophoresis.
Goldenberg, D. P. (1996) In Current Protocols in Protein Science (J. Coligan, B. Dunn, H. Ploegh, D. Speicher and P. Wingfield, eds.), pp. 7.4.1 - 7.4.13. Wiley, New York.

Effects of amino acid replacements on the reductive unfolding kinetics of pancreatic trypsin inhibitor.
Mendoza, J. A., Jarstfer, M. B. and Goldenberg, D. P. (1994) Biochemistry 33, 1143-1148. Medline

Amino acid replacement that eliminates kinetic traps in the BPTI folding pathway.
Zhang, J.-X. and Goldenberg, D. P. (1993) Biochemistry 32, 14075-14081. Medline

Small effects of amino acid replacements on the reduced and unfolded state of pancreatic trypsin inhibitor.
Goldenberg, D. P. and Zhang, J. X. (1993) Proteins: Struct. Funct. Genet. 15, 322-329. Medline

Probing the determinants of disulfide stability in native pancreatic trypsin inhibitor.
Goldenberg, D. P., Bekeart, L. S., Laheru, D. A. and Zhou, J. D. (1993) Biochemistry 32, 2835-44. Medline

Genetic dissection of pancreatic trypsin inhibitor.
Goldenberg, D. P., Berger, J. M., Laheru, D. A., Wooden, S. and Zhang, J.-X. (1992) Proc. Natl. Acad. Sci., USA 89, 5083-5087. Medline

Native and non-native intermediates in the BPTI folding pathway.
Goldenberg, D. P. (1992) Trends Biochem. Sci. 17, 257-261. Medline

Correlation between mutational destabilization of phage T4 lysozyme and increased unfolding rates.
Klemm, J. D., Wozniak, J. A., Alber, T. and Goldenberg, D. P. (1991) Biochemistry 30, 589-594. Medline

A genetic screen to identify variants of bovine pancreatic trypsin inhibitor with altered folding energetics.
Coplen, L. J., Frieden, R. W. and Goldenberg, D. P. (1990) Proteins: Struct. Funct. Genet. 7, 16-31. Medline

Mutational analysis of a protein folding pathway.
Goldenberg, D. P., Frieden, R. W., Haack, J. A. and Morrison, T. B. (1989)Nature 338, 127-132. Medline

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